MINNEAPOLIS — Minnesota fired coach Tracy Claeys on Tuesday, just over two weeks after the football program became embroiled in a standoff with the administration over the suspension of 10 players in connection with allegations of sexual assault.

Athletic director Mark Coyle said he made the decision to “address challenges in recruiting, ticket sales and the culture of the program. We need strong leadership to take Gopher football to the next level and address these challenges.”

“Academically the team was doing well. We finished 9-4. But if I could show you all the emails I got after the Wisconsin game,” Coyle said of the 31-17 loss in Madison to end the season. “That’s the great thing about our fans, you hear from them. Moving forward, there’s no reason we can’t compete at a high level academically, athletically and socially, through all 25 programs, through all 700 student-athletes.”

The Golden Gophers beat Washington State in the Holiday Bowl last week, a game overshadowed by a threatened boycott of the bowl by the entire team a week earlier. The players ultimately decided against a boycott.

Claeys publicly supported his players in lobbying for fairness in the sexual assault investigation. A tweet he sent out in support of their movement drew wide criticism from victims’ rights groups and faculty on campus.

Claeys later said he chose his words poorly and planned to donate $50,000 to raise awareness for sexual assault victims.

The 48-year-old Claeys went 11-8 in a year and a half leading the Gophers. The former defensive coordinator became a head coach for the first time when he took over midway through 2015 after Jerry Kill was forced to retire because of health issues. Coyle said in late November that Claeys and his staff would return next season. But that was before the standoff in mid-December.

“I saw a team that competed. I saw a team that gave up halftime leads, the same thing you all saw,” Coyle said. “But again, it was just an overall evaluation of the program and moving forward, we want to find a leader who embraces what Minnesota is all about. That’s what our goal’s going to be.”

Claeys was the first Gophers coach to win his first two bowl games, and he teamed with defensive coordinator Jay Sawvel to stock a stout defense with NFL-caliber players. But the program was rocked in December when the university announced that 10 players would be suspended for the Holiday Bowl after a school-led investigation into allegations by a woman who said she was pressured into sex with multiple players.

Two days after the suspensions, the entire team held a news conference to announce that more than 100 players planned to boycott all team activities until their 10 teammates were reinstated.

“Have never been more proud of our kids. I respect their rights (and) support their effort to make a better world!” Claeys tweeted shortly after the news conference.

That stance seemed to clash with the administration, particularly Coyle and President Eric Kaler, who were determined to respond decisively to allegations that had upset the community.

Coyle said Tuesday the tweet “was not helpful. I accept that Coach Claeys intended it to support the boycotting players. Understandably others did not see it that way.”

Claeys would later say that he was not being dismissive of the allegations or sexual assault in general, but rather supporting his players’ push for due process in the school’s Title IX investigation.

“How can someone make such an idiotic decision,” Gophers linebacker Carter Coughlin tweeted.

Additionally damaging to Claeys and the program, a 17-year-old recruit was alleged to have had sex with the woman that night. All of the accused players told investigators the sex was consensual, and Hennepin County authorities twice chose not to file charges because they said they had insufficient evidence.

But the university’s investigation by the Equal Opportunity and Affirmative Action office has a lower threshold for proof than the criminal justice system, and the report leaked to television station KSTP said school investigators found the woman’s account of the night to be more credible than the accounts given by the players.

The team rescinded its boycott after a day and a half, but players remain deeply upset at the administration over its handling of the situation.

“I get they’re upset. I get they’re frustrated. I understand that,” Coyle said. “It’s our job to find a leader who will take this program forward and unite all of them in one direction, one goal.”

It is difficult to argue Claeys’ accomplishments on the field. The Gophers’ nine victories, albeit against a soft schedule, were their most since Glen Mason led them to a 10-3 finish in 2003. Claeys has a buyout of $500,000 on the two years remaining on his contract.

Candidates immediately expected to be considered for the opening include Western Michigan’s P.J. Fleck, former LSU and Oklahoma State coach Les Miles and Boise State’s Bryan Harsin, who was hired by Coyle when he worked there.